An R package for automating the processing and analysis of MODIS Land Products raster datasets has recently been released by Lorenzo Busetto and Luigi Ranghetti at the Institute for Electromagnetic Sensing of Environment, National Research Council of Italy (IREA-CNR). This package, called MODIStsp, is available for download on GitHub. It provides a user-friendly GUI, batch processing utilities, and access to source code for user modification and customisation. MODIStsp has the capability of performing several preprocessing steps (e.g. download, mosaicing, reprojection and resize) on MODIS products, and on-the-fly computation of time series of Spectral Indexes
For more details and package release information, please visit Spatial Processing in R blog and see the paper published in Computers & Geosciences journal.